Difference between revisions of "PB-Assembly"
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Revision as of 17:06, 21 August 2022
Description
pb-assembly is a collection of PacBio software including the following applications and their dependencies:
- FALCON assembly
- FALCON-Unzip to phase the genome and perform phased-polishing with Arrow
- FALCON-Phase to extend phasing between unzipped haplotig blocks (requires HiC data)
Environment Modules
Run module spider pb-assembly to find out what environment modules are available for this application.
System Variables
- HPC_PB-ASSEMBLY_DIR - installation directory