Picard-tools: Difference between revisions
Jump to navigation
Jump to search
Moskalenko (talk | contribs) m Text replacement - "#uppercase" to "uc" |
No edit summary |
||
| Line 1: | Line 1: | ||
[[Category:Software]][[Category:biology]][[Category:bioinformatics]][[Category: | [[Category:Software]][[Category:biology]][[Category:bioinformatics]][[Category:NGS]] | ||
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|picard}} | |{{#vardefine:app|picard}} | ||
Revision as of 14:15, 27 May 2022
Description
Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF. These file formats are defined in the Hts-specs repository. See especially the SAM specification and the VCF specification.
Environment Modules
Run module spider picard to find out what environment modules are available for this application.
System Variables
- HPC_PICARD_DIR - installation directory