Difference between revisions of "Bam-Readcount"
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| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
Latest revision as of 15:11, 10 June 2022
Description
The purpose of this program is to generate metrics at single nucleotide positions. There are number of metrics generated which can be useful for filtering out false positive calls.
Environment Modules
Run module spider bam-readcount to find out what environment modules are available for this application.
System Variables
- HPC_BAM-READCOUNT_DIR - installation directory