Difference between revisions of "OrganellePBA"
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(Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|organellepba}} |{{#vardefine:url|https://github.com/aubombarely/Organelle_PB...") |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
Latest revision as of 21:22, 6 December 2019
Description
OrganelleRef_PBA is a script to perform a de-novo PacBio assemblies of any organelle (chloroplast or mitochondrial genomes) using several programs.
Environment Modules
Run module spider organellepba to find out what environment modules are available for this application.
System Variables
- HPC_ORGANELLEPBA_DIR - installation directory
- HPC_ORGANELLEPBA_BIN - executable directory