Dammit: Difference between revisions
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Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|dammit}} |{{#vardefine:url|https://github.com/camillesco..." |
Moskalenko (talk | contribs) m Text replacement - "#uppercase" to "uc" |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
* HPC_{{ | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
* DAMMIT_DB_DIR - database directory | * DAMMIT_DB_DIR - database directory | ||
Latest revision as of 21:20, 6 December 2019
Description
dammit is a simple de novo transcriptome annotator. It was born out of the observation that: annotation is mundane and annoying; all the individual pieces of the process exist already; and, the existing solutions are overly complicated or rely on crappy non-free software.
Environment Modules
Run module spider dammit to find out what environment modules are available for this application.
System Variables
- HPC_DAMMIT_DIR - installation directory
- DAMMIT_DB_DIR - database directory