Difference between revisions of "PIA2"

From UFRC
Jump to navigation Jump to search
(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pia2}} |{{#vardefine:url|https://github.com/xibalbanus/P...")
 
m (Text replacement - "#uppercase" to "uc")
 
Line 24: Line 24:
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
+
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Latest revision as of 21:22, 6 December 2019

Description

pia2 website  

Modified version of the Phylogenetically Informed Annotation tool (Speiser et al., 2014)

Environment Modules

Run module spider pia2 to find out what environment modules are available for this application.

System Variables

  • HPC_PIA2_DIR - installation directory
  • HPC_PIA2_BIN - executable directory