Difference between revisions of "Albacore"
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{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|albacore}} | |{{#vardefine:app|albacore}} | ||
| − | |{{#vardefine:url|https:// | + | |{{#vardefine:url|https://community.nanoporetech.com}} |
<!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | <!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | ||
|{{#vardefine:conf|}} <!--CONFIGURATION--> | |{{#vardefine:conf|}} <!--CONFIGURATION--> | ||
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{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | {{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | ||
| − | Albacore | + | Albacore is the official basecaller for data generated with equipment produced by Oxford Nanopore Technologies such as minION, GridION, and PromethION. |
<!--Modules--> | <!--Modules--> | ||
Revision as of 18:23, 12 July 2018
Description
Albacore is the official basecaller for data generated with equipment produced by Oxford Nanopore Technologies such as minION, GridION, and PromethION.
Environment Modules
Run module spider albacore to find out what environment modules are available for this application.
System Variables
- HPC_{{#uppercase:albacore}}_DIR - installation directory
- HPC_{{#uppercase:albacore}}_BIN - executable directory