Difference between revisions of "MEME"
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| + | The MEME Suite allows you to: | ||
| + | |||
| + | * Discover motifs using MEME or GLAM2 on groups of related DNA or protein sequences. | ||
| + | * Search sequence databases using motifs. | ||
| + | * Compare a motif to all motifs in a database of motifs, and. | ||
| + | * Associate motifs with Gene Ontology terms via their putative target genes. | ||
| − | |||
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Revision as of 19:40, 26 February 2018
Description
meme website
The MEME Suite allows you to:
- Discover motifs using MEME or GLAM2 on groups of related DNA or protein sequences.
- Search sequence databases using motifs.
- Compare a motif to all motifs in a database of motifs, and.
- Associate motifs with Gene Ontology terms via their putative target genes.
Environment Modules
Run module spider meme to find out what environment modules are available for this application.
System Variables
- HPC_{{#uppercase:meme}}_DIR - installation directory
- HPC_{{#uppercase:meme}}_BIN - executable directory
- HPC_{{#uppercase:meme}}_DOC - documentation directory