Difference between revisions of "Pbalign"
Jump to navigation
Jump to search
(Created page with "Category:SoftwareCategory:biologyCategory:bioinformatics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pbalign}} |{{#vardefine:url|https://github.com/PacificB...") |
Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
||
| Line 24: | Line 24: | ||
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:22, 6 December 2019
Description
pbalign maps PacBio reads to reference sequences.
Environment Modules
Run module spider pbalign to find out what environment modules are available for this application.
System Variables
- HPC_PBALIGN_DIR - installation directory
- HPC_PBALIGN_BIN - executable directory