Difference between revisions of "GraPhlAn"

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(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|graphlan}} |{{#vardefine:url|https://huttenhower.sph.har...")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
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* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
* HPC_{{#uppercase:{{#var:app}}}}_DOC - documentation directory
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* HPC_{{uc:{{#var:app}}}}_DOC - documentation directory
* HPC_{{#uppercase:{{#var:app}}}}_EXE - example directory
+
* HPC_{{uc:{{#var:app}}}}_EXE - example directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Latest revision as of 21:21, 6 December 2019

Description

graphlan website  

GraPhlAn is a software tool for producing high-quality circular representations of taxonomic and phylogenetic trees. GraPhlAn focuses on concise, integrative, informative, and publication-ready representations of phylogenetically- and taxonomically-driven investigation.

Environment Modules

Run module spider graphlan to find out what environment modules are available for this application.

System Variables

  • HPC_GRAPHLAN_DIR - installation directory
  • HPC_GRAPHLAN_BIN - executable directory
  • HPC_GRAPHLAN_DOC - documentation directory
  • HPC_GRAPHLAN_EXE - example directory