Difference between revisions of "SInC"
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(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|sinc}} |{{#vardefine:url|https://sourceforge.net/project...") |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
Latest revision as of 21:24, 6 December 2019
Description
SInC: An accurate and fast error-model based simulator for SNPs, Indels and CNVs coupled with a read generator for short-read sequence data.
Environment Modules
Run module spider sinc to find out what environment modules are available for this application.
System Variables
- HPC_SINC_DIR - installation directory
- HPC_SINC_BIN - executable directory
Citation
If you publish research that uses sinc you have to cite it as follows:
Swetansu Pattnaik, Saurabh Gupta, Arjun A Rao and Binay Panda, 2014