Difference between revisions of "Intervene"

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(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|intervene}} |{{#vardefine:url|https://github.com/asntech...")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
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* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
* HPC_{{#uppercase:{{#var:app}}}}_LIB - library directory
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* HPC_{{uc:{{#var:app}}}}_LIB - library directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Latest revision as of 21:21, 6 December 2019

Description

intervene website  

Intervene: a tool for intersection and visualization of multiple genomic region and gene sets http://intervene.rtfd.io/

Environment Modules

Run module spider intervene to find out what environment modules are available for this application.

System Variables

  • HPC_INTERVENE_DIR - installation directory
  • HPC_INTERVENE_BIN - executable directory
  • HPC_INTERVENE_LIB - library directory




Citation

If you publish research that uses intervene you have to cite it as follows:

Khan A, Mathelier A. Intervene: a tool for intersection and visualization of multiple gene or genomic region sets. BMC Bioinformatics. 2017;18:287. doi: 10.1186/s12859-017-1708-7