Difference between revisions of "MetaCherchant"
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_LIB - library directory |
<!--Configuration--> | <!--Configuration--> | ||
Latest revision as of 21:22, 6 December 2019
Description
MetaCherchant is a tool for analysing genomic environment of a nucleotide sequence within a metagenome. The implementation is based on MetaFast source code.
Environment Modules
Run module spider metacherchant to find out what environment modules are available for this application.
System Variables
- HPC_METACHERCHANT_DIR - installation directory
- HPC_METACHERCHANT_BIN - executable directory
- HPC_METACHERCHANT_LIB - library directory