Difference between revisions of "VCF-kit"
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
Revision as of 21:29, 6 December 2019
Description
VCF-kit is a command-line based collection of utilities for performing analysis on Variant Call Format (VCF) files. A summary of the commands is provided below.
Required Modules
Serial
- gcc/5.2.0
- vcf-kit
System Variables
- HPC_VCF-KIT_DIR - installation directory
- HPC_VCF-KIT_BIN - executable directory