Difference between revisions of "GenotypeHarmonizer"
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DOC - documentation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_EXE - example directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:20, 6 December 2019
Description
The Genotype Harmonizer is an easy to use command-line tool that allows harmonization of genotype data stored using different file formats with different and potentially unknown strands.
Required Modules
Serial
- GenotypeHarmonizer
System Variables
- HPC_GENOTYPEHARMONIZER_DIR - installation directory
- HPC_GENOTYPEHARMONIZER_BIN - executable directory
- HPC_GENOTYPEHARMONIZER_DOC - documentation directory
- HPC_GENOTYPEHARMONIZER_EXE - example directory
Citation
If you publish research that uses GenotypeHarmonizer you have to cite it as follows:
https://bmcresnotes.biomedcentral.com/articles/10.1186/1756-0500-7-901