Difference between revisions of "IRFinder"
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(Created page with "Category:SoftwareCategory:BiologyCategory:RNA-Seq {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|irfinder}} |{{#vardefine:url|https://github.com/williamritchie...") |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Revision as of 21:21, 6 December 2019
Description
Detecting intron retention from RNA-Seq experiments
Required Modules
Serial
- gcc/5.2.0
- irfinder
System Variables
- HPC_IRFINDER_DIR - installation directory
- HPC_IRFINDER_BIN - executable directory