Difference between revisions of "SMC++"
Jump to navigation
Jump to search
| Line 71: | Line 71: | ||
If you publish research that uses {{#var:app}} you have to cite it as follows: | If you publish research that uses {{#var:app}} you have to cite it as follows: | ||
| − | [http://www.nature.com/ng/journal/v49/n2/abs/ng.3748.html J. Terhorst, J. A. Kamm, and Y. S. Song. Robust and scalable inference | + | [http://www.nature.com/ng/journal/v49/n2/abs/ng.3748.html J. Terhorst, J. A. Kamm, and Y. S. Song. Robust and scalable inference of population history from hundreds of unphased whole genomes. Nature Genetics, 49(2):303–309, 2017.] |
| − | of population history from hundreds of unphased whole genomes. Nature | ||
| − | Genetics, 49(2):303–309, 2017.] | ||
|}} | |}} | ||
Revision as of 14:42, 24 February 2017
Description
SMC++ is a program for estimating the size history of populations from whole genome sequence data.
Required Modules
Serial
- gcc/5.2.0
- smcpp
System Variables
- HPC_{{#uppercase:smcpp}}_DIR - installation directory
- HPC_{{#uppercase:smcpp}}_BIN - executable directory
Citation
If you publish research that uses smcpp you have to cite it as follows: