Difference between revisions of "CLARK"

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==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
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{{#if: {{#var: conf}}|==Configuration==

Revision as of 21:18, 6 December 2019

Description

clark website  

CLARK: Fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers


Required Modules

Serial

  • clark

System Variables

  • HPC_CLARK_DIR - installation directory




Citation

If you publish research that uses clark you have to cite it as follows:

Ounit R, Wanamaker S, Close TJ, Lonardi S, CLARK: fast and accurate classification of metagenomic and genomic sequences using discriminative k-mers BMC Genomics 2015, 16:236.