Difference between revisions of "Auto3DEM"
Jump to navigation
Jump to search
| Line 23: | Line 23: | ||
==Required Modules== | ==Required Modules== | ||
| + | <!-- | ||
===Serial=== | ===Serial=== | ||
* {{#var:app}} | * {{#var:app}} | ||
| Line 28: | Line 29: | ||
* intel | * intel | ||
* {{#var:app}} | * {{#var:app}} | ||
| + | --> | ||
===Parallel (MPI)=== | ===Parallel (MPI)=== | ||
* intel | * intel | ||
Revision as of 17:13, 6 October 2015
Description
Auto3DEM is a semi-automated image reconstruction system that provides all the tools to process raw micrographs acquired at an electron microscope and generate a three-dimensional reconstruction. The most intensive computational procedure like orientation search and reconstruction can be executed either in serial or in parallel on a computer cluster.
Required Modules
Parallel (MPI)
- intel
- openmpi
- auto3dem
System Variables
- HPC_{{#uppercase:auto3dem}}_DIR - installation directory