Auto3DEM: Difference between revisions
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==System Variables== | ==System Variables== | ||
Revision as of 12:20, 21 September 2015
Description
Auto3DEM is a semi-automated image reconstruction system that provides all the tools to process raw micrographs acquired at an electron microscope and generate a three-dimensional reconstruction. The most intensive computational procedure like orientation search and reconstruction can be executed either in serial or in parallel on a computer cluster.
Required Modules
Serial
- auto3dem
Parallel (OpenMP)
- intel
- auto3dem
Parallel (MPI)
- intel
- openmpi
- auto3dem
System Variables
- HPC_{{#uppercase:auto3dem}}_DIR - installation directory