Difference between revisions of "ANDI"
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Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:BiologyCategory:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|ANDI}} |{{#vardefine:url|https://github.com/evolbioinf/andi/}...") |
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| − | + | ANDI install includes a manual page (man andi) and a pdf manual in $HPC_ANDI_DOC directory. | |
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Latest revision as of 14:11, 20 February 2023
Description
ANDI is a program for estimating the evolutionary distance between closely related genomes. These distances can be used to rapidly infer phylogenies for big sets of genomes. Because andi does not compute full alignments, it is so efficient that it scales even up to thousands of bacterial genomes.
Environment Modules
Run module spider ANDI to find out what environment modules are available for this application.
System Variables
- HPC_ANDI_DIR - installation directory
Additional Information
ANDI install includes a manual page (man andi) and a pdf manual in $HPC_ANDI_DOC directory.