Difference between revisions of "CNVkit"
Jump to navigation
Jump to search
| Line 1: | Line 1: | ||
| − | [[Category:Software]] | + | [[Category:Software]][[Category:Phylogenetics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|cnvkit}} | |{{#vardefine:app|cnvkit}} | ||
Latest revision as of 13:50, 15 August 2022
Description
A command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from targeted DNA sequencing.
Environment Modules
Run module spider cnvkit to find out what environment modules are available for this application.
System Variables
- HPC_CNVKIT_DIR - installation directory
- HPC_CNVKIT_BIN - executable directory