Difference between revisions of "BIRDS"

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[[Category:Software]][[Category:Imaging]][[Category:Workflow Automation]][[Category:Utility]]
 
{|<!--CONFIGURATION: REQUIRED-->
 
{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|BIRDS}}
 
|{{#vardefine:app|BIRDS}}

Latest revision as of 13:01, 15 August 2022

Description

BIRDS website  

BIRDS(Bi-channel Image Registration and Deep-learning Segmentation for efficient, versatile mapping of mouse brain)is an open source automation pipeline suitable for brain data from different microscopy platforms.

Environment Modules

Run module spider BIRDS to find out what environment modules are available for this application.

System Variables

  • HPC_BIRDS_DIR - installation directory