Difference between revisions of "SomaticSeq"
Jump to navigation
Jump to search
m (Israel.herrera moved page Somaticseq to SomaticSeq) |
|||
| Line 1: | Line 1: | ||
| − | [[Category:Software]][[Category:Software]] | + | [[Category:Software]][[Category:Software]][[Category:Phylogenetics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|somaticseq}} | |{{#vardefine:app|somaticseq}} | ||
Latest revision as of 00:06, 22 August 2022
Description
SomaticSeq is an ensemble caller that has the ability to use machine learning to filter out false positives. The detailed documentation is included in the repo, located in docs/Manual.pdf.
Environment Modules
Run module spider somaticseq to find out what environment modules are available for this application.
System Variables
- HPC_SOMATICSEQ_DIR - installation directory
- HPC_SOMATICSEQ_BIN - executable directory