Difference between revisions of "Phenix"
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PHENIX is a software suite for the automated determination of macromolecular structures using X-ray crystallography and other methods. | PHENIX is a software suite for the automated determination of macromolecular structures using X-ray crystallography and other methods. | ||
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| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{uc:{{#var:app}}}}_DIR | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
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{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 18:12, 21 August 2022
Description
PHENIX is a software suite for the automated determination of macromolecular structures using X-ray crystallography and other methods.
Environment Modules
Run module spider phenix to find out what environment modules are available for this application.
System Variables
- HPC_PHENIX_DIR - installation directory
Additional Information
The Graphical User Interface to Phenix can be used to visualize the results of the analyses. It can be run on a gui node.
Citation
If you publish research that uses phenix you have to cite it as follows:
PHENIX: a comprehensive Python-based system for macromolecular structure solution. P. D. Adams, P. V. Afonine, G. Bunkóczi, V. B. Chen, I. W. Davis, N. Echols, J. J. Headd, L.-W. Hung, G. J. Kapral, R. W. Grosse-Kunstleve, A. J. McCoy, N. W. Moriarty, R. Oeffner, R. J. Read, D. C. Richardson, J. S. Richardson, T. C. Terwilliger and P. H. Zwart. Acta Cryst. D66, 213-221 (2010).