Difference between revisions of "Bamsnap"
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(Created page with "Category:Software[ {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|Bamsnap}} |{{#vardefine:url|https://github.com/parklab/bamsnap}} <!--CONFIGURATION: OPTIONAL (|1}} me...") |
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| − | [[Category:Software]][ | + | [[Category:Software]][[Category:Phylogenetics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
| − | |{{#vardefine:app| | + | |{{#vardefine:app|bamsnap}} |
|{{#vardefine:url|https://github.com/parklab/bamsnap}} | |{{#vardefine:url|https://github.com/parklab/bamsnap}} | ||
<!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | <!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | ||
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{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | {{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | ||
| − | + | BamSnap: a lightweight command-based visualization tool for sequencing reads in BAM files | |
<!--Modules--> | <!--Modules--> | ||
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==System Variables== | ==System Variables== | ||
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory | ||
| + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory | ||
| + | |||
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 16:14, 27 May 2022
Description
BamSnap: a lightweight command-based visualization tool for sequencing reads in BAM files
Environment Modules
Run module spider bamsnap to find out what environment modules are available for this application.
System Variables
- HPC_BAMSNAP_DIR - installation directory
- HPC_BAMSNAP_BIN - executable directory