Difference between revisions of "Skmer"

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[[Category:Software]][[Category:genomics‏‎]][[Category:Biology]]
 
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{|<!--CONFIGURATION: REQUIRED-->
 
|{{#vardefine:app|skmer}}
 
|{{#vardefine:app|skmer}}

Latest revision as of 13:31, 15 August 2022

Description

skmer website  

Skmer is a fast tool for estimating distances between genomes from low-coverage sequencing reads (genome-skims), without needing any assembly or alignment step.

Environment Modules

Run module spider skmer to find out what environment modules are available for this application.

System Variables

  • HPC_SKMER_DIR - installation directory
  • HPC_SKMER_BIN - executable directory