Difference between revisions of "PRSice"
Jump to navigation
Jump to search
(Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|prsice}} |{{#vardefine:url|https://www.prsice.info/}} <!--CONFIGURATION: OPT...") |
|||
(One intermediate revision by the same user not shown) | |||
Line 10: | Line 10: | ||
|{{#vardefine:testing|}} <!--PROFILING--> | |{{#vardefine:testing|}} <!--PROFILING--> | ||
|{{#vardefine:faq|}} <!--FAQ--> | |{{#vardefine:faq|}} <!--FAQ--> | ||
− | |{{#vardefine:citation|}} <!--CITATION--> | + | |{{#vardefine:citation|1}} <!--CITATION--> |
|{{#vardefine:installation|}} <!--INSTALLATION--> | |{{#vardefine:installation|}} <!--INSTALLATION--> | ||
|} | |} | ||
Line 61: | Line 61: | ||
If you publish research that uses {{#var:app}} you have to cite it as follows: | If you publish research that uses {{#var:app}} you have to cite it as follows: | ||
− | [Choi SW, and O’Reilly PF. "PRSice-2: Polygenic Risk Score Software for Biobank-Scale Data." GigaScience 8, no. 7 (July 1, 2019).] | + | [https://academic.oup.com/gigascience/article/8/7/giz082/5532407 Choi SW, and O’Reilly PF. "PRSice-2: Polygenic Risk Score Software for Biobank-Scale Data." GigaScience 8, no. 7 (July 1, 2019).] |
|}} | |}} |
Latest revision as of 14:26, 1 February 2021
Description
PRSice (pronounced 'precise') is a Polygenic Risk Score software for calculating, applying, evaluating and plotting the results of polygenic risk scores (PRS) analyses.
Environment Modules
Run module spider prsice
to find out what environment modules are available for this application.
System Variables
- HPC_PRSICE_DIR - installation directory
- HPC_PRSICE_BIN - executable directory
- HPC_PRSICE_DAT - data directory
Citation
If you publish research that uses prsice you have to cite it as follows: