Difference between revisions of "GetOrganelle"
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(Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|getorganelle}} |{{#vardefine:url|https://github.com/Kinggerm/GetOrganelle}}...") |
Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
Latest revision as of 21:21, 6 December 2019
Description
This toolkit assemblies organelle genome from genomic skimming data.
Environment Modules
Run module spider getorganelle to find out what environment modules are available for this application.
System Variables
- HPC_GETORGANELLE_DIR - installation directory
- HPC_GETORGANELLE_BIN - executable directory
Citation
If you publish research that uses getorganelle you have to cite it as follows: