Difference between revisions of "VISPR"
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(Created page with "Category:SoftwareCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|vispr}} |{{#vardefine:url|https://bitbucket.org/liulab/vispr/overview}} <!--...") |
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<!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | <!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | ||
|{{#vardefine:conf|}} <!--CONFIGURATION--> | |{{#vardefine:conf|}} <!--CONFIGURATION--> | ||
| − | |{{#vardefine:exe|}} <!--ADDITIONAL INFO--> | + | |{{#vardefine:exe|1}} <!--ADDITIONAL INFO--> |
|{{#vardefine:job|}} <!--JOB SCRIPTS--> | |{{#vardefine:job|}} <!--JOB SCRIPTS--> | ||
|{{#vardefine:policy|}} <!--POLICY--> | |{{#vardefine:policy|}} <!--POLICY--> | ||
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
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See the [[{{PAGENAME}}_Configuration]] page for {{#var: app}} configuration details. | See the [[{{PAGENAME}}_Configuration]] page for {{#var: app}} configuration details. | ||
|}} | |}} | ||
| + | |||
<!--Run--> | <!--Run--> | ||
{{#if: {{#var: exe}}|==Additional Information== | {{#if: {{#var: exe}}|==Additional Information== | ||
| − | + | To view <$ vispr server ...> results please launch an OOD Desktop instance and load the module "ubuntu" to access the web browser that will be hosted. | |
|}} | |}} | ||
Latest revision as of 15:53, 21 June 2023
Description
VISPR - A visualization framework for CRISPR data.
Environment Modules
Run module spider vispr to find out what environment modules are available for this application.
System Variables
- HPC_VISPR_DIR - installation directory
- HPC_VISPR_BIN - executable directory
Additional Information
To view <$ vispr server ...> results please launch an OOD Desktop instance and load the module "ubuntu" to access the web browser that will be hosted.