Difference between revisions of "IMa2p"

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(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|ima2p}} |{{#vardefine:url|https://github.com/arunsethura...")
 
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
* HPC_{{#uppercase:{{#var:app}}}}_BIN - executable directory
+
* HPC_{{uc:{{#var:app}}}}_BIN - executable directory
  
 
<!--Configuration-->
 
<!--Configuration-->

Latest revision as of 21:21, 6 December 2019

Description

ima2p website  

IMa2p is a parallel implementation of IMa2, using OpenMPI-C++ - a Bayesian MCMC based method for inferring population demography under the IM (Isolation with Migration) model. Please refer to Sethuraman and Hey (2015) for details of implementation.

Environment Modules

Run module spider ima2p to find out what environment modules are available for this application.

System Variables

  • HPC_IMA2P_DIR - installation directory
  • HPC_IMA2P_BIN - executable directory