Difference between revisions of "Exonerate"
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| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:Genomics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|exonerate}} | |{{#vardefine:app|exonerate}} | ||
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| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
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See the [[{{PAGENAME}}_Install]] page for {{#var: app}} installation notes.|}} | See the [[{{PAGENAME}}_Install]] page for {{#var: app}} installation notes.|}} | ||
__NOTOC____NOEDITSECTION__ | __NOTOC____NOEDITSECTION__ | ||
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Latest revision as of 18:53, 12 August 2022
Description
- Exonerate is a generic tool for pairwise sequence comparison.
- It allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics.
- If you have questions, you can email the Author.
Environment Modules
Run module spider exonerate to find out what environment modules are available for this application.
System Variables
- HPC_EXONERATE_DIR - installation directory