Difference between revisions of "MstatX"
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(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|mstatx}} |{{#vardefine:url|https://github.com/gcollet/Ms...") |
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 21:22, 6 December 2019
Description
The aim of the MstatX project is to provide an easy-to-use and easy-to-extend application to derive statistics from a multiple alignment file.
MstatX only takes a multiple alignment in input with the option flag -i or --input. The default statistic is the wentropy. The description of the available statistics is in the manual and also in the code.
Environment Modules
Run module spider mstatx to find out what environment modules are available for this application.
System Variables
- HPC_MSTATX_DIR - installation directory