Difference between revisions of "NanoPlot"
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(Created page with "Category:SoftwareCategory:BiologyCategory:Plotting {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|nanoplot}} |{{#vardefine:url|https://github.com/wdecoster/Nan...") |
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| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Bioinformatics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
| − | |{{#vardefine:app| | + | |{{#vardefine:app|tidk}} |
| − | |{{#vardefine:url|https://github.com/ | + | |{{#vardefine:url|https://github.com/tolkit/telomeric-identifier}} |
<!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | <!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | ||
|{{#vardefine:conf|}} <!--CONFIGURATION--> | |{{#vardefine:conf|}} <!--CONFIGURATION--> | ||
| Line 18: | Line 18: | ||
{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | {{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | ||
| − | + | Tidk (Telomeric Identifier) is a tool for identifying and analyzing telomeric sequences in genomic data. | |
| − | Includes: | + | Includes: Telomere identification, sequence analysis, and visualization tools. |
<!--Modules--> | <!--Modules--> | ||
| Line 26: | Line 26: | ||
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 14:41, 6 August 2024
Description
Tidk (Telomeric Identifier) is a tool for identifying and analyzing telomeric sequences in genomic data.
Includes: Telomere identification, sequence analysis, and visualization tools.
Environment Modules
Run module spider tidk to find out what environment modules are available for this application.
System Variables
- HPC_TIDK_DIR - installation directory
- HPC_TIDK_BIN - executable directory