Difference between revisions of "Pbalign"
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(Created page with "Category:SoftwareCategory:biologyCategory:bioinformatics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|pbalign}} |{{#vardefine:url|https://github.com/PacificB...") |
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| − | [[Category:Software]][[Category:biology | + | [[Category:Software]][[Category:biology]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|pbalign}} | |{{#vardefine:app|pbalign}} | ||
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 20:15, 12 August 2022
Description
pbalign maps PacBio reads to reference sequences.
Environment Modules
Run module spider pbalign to find out what environment modules are available for this application.
System Variables
- HPC_PBALIGN_DIR - installation directory
- HPC_PBALIGN_BIN - executable directory