Difference between revisions of "TRIPLEC"
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(Created page with "Category:SoftwareCategory:biologyCategory:bioinformatics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|triplec}} |{{#vardefine:url|http://www.cibiv.at/softwar...") |
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{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|triplec}} | |{{#vardefine:app|triplec}} | ||
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 20:52, 12 August 2022
Description
The program is called triplec for Triple consensus and is written in java version 1.5. So it should run without problems on Mac, Windows and *nix machines. Although the program has been tested quite thoroughly it is a work in progress and must be treated as such. In particular most of the testing and simulations were mainly done on bifurcated trees. Finally don't forget that this method works only for rooted topologies.
Environment Modules
Run module spider triplec to find out what environment modules are available for this application.
System Variables
- HPC_TRIPLEC_DIR - installation directory
- HPC_TRIPLEC_BIN - executable directory