Difference between revisions of "4p"
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| − | [[Category:Software]][[Category:Biology]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:Variant Calling]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|4p}} | |{{#vardefine:app|4p}} | ||
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| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 20:36, 11 August 2022
Description
4P (Parallel Processing of Polymorphism Panels) is a software for computing population genetics statistics from large SNPs dataset.
The input data types handled by the program include ped/map, arp and vcf files.
Environment Modules
Run module spider 4p to find out what environment modules are available for this application.
System Variables
- HPC_4P_DIR - installation directory
Citation
If you publish research that uses 4p you have to cite it as follows:
4P: fast computing of population genetics statistics from large DNA polymorphism panels