Difference between revisions of "LobSTR"
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| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| + | * LOBSTR_INDEXES - indexes directory | ||
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 15:19, 10 June 2022
Description
lobSTR is a tool for profiling Short Tandem Repeats (STRs) from high throughput sequencing data.
Environment Modules
Run module spider lobstr to find out what environment modules are available for this application.
System Variables
- HPC_LOBSTR_DIR - installation directory
- HPC_LOBSTR_BIN - executable directory
- LOBSTR_INDEXES - indexes directory