Difference between revisions of "RevBayes"

From UFRC
Jump to navigation Jump to search
(Created page with "Category:SoftwareCategory:BiologyCategory:Phylogenetics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|revbayes}} |{{#vardefine:url|http://revbayes.github.io/a...")
 
 
(One intermediate revision by one other user not shown)
Line 21: Line 21:
  
 
<!--Modules-->
 
<!--Modules-->
==Required Modules==
+
==Environment Modules==
 
+
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
===Serial===
 
* {{#var:app}}
 
<!--
 
===Parallel (OpenMP)===
 
* intel
 
* {{#var:app}}
 
===Parallel (MPI)===
 
* intel
 
* openmpi
 
* {{#var:app}}
 
-->
 
 
==System Variables==
 
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
+
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
 
<!--Configuration-->
 
<!--Configuration-->
 
{{#if: {{#var: conf}}|==Configuration==
 
{{#if: {{#var: conf}}|==Configuration==

Latest revision as of 16:04, 10 June 2022

Description

revbayes website  

Bayesian phylogenetic inference using probabilistic graphical models and an interpreted language.

Environment Modules

Run module spider revbayes to find out what environment modules are available for this application.

System Variables

  • HPC_REVBAYES_DIR - installation directory




Citation

If you publish research that uses revbayes you have to cite it as follows:

Höhna, S., Heath, T. A., Boussau, B., Landis, M. J., Ronquist, F., Huelsenbeck, J. P. (2014). Probabilistic graphical model representation in phylogenetics. Systematic Biology 63:753–771.