Difference between revisions of "SNAPE-pooled"
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
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{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 12:56, 15 August 2022
Description
SNAPE-pooled computes the probability distribution for the frequency of the minor allele in a certain population, at a certain position in the genome. If this probability is high enough, then you have a segregating position, a.k.a. SNP.
Environment Modules
Run module spider snape-pooled to find out what environment modules are available for this application.
System Variables
- HPC_SNAPE-POOLED_DIR - installation directory