Difference between revisions of "TraitRate"
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Latest revision as of 16:54, 22 August 2022
Description
traitRate is a program for the detection of trait-dependent shifts in the rate of sequence evolution.
Sample input files are available at http://www.tau.ac.il/~itaymay/cp/traitRate/index.html and in the "$HPC_TRAITRATE_EXE" directory.
Environment Modules
Run module spider traitrate to find out what environment modules are available for this application.
System Variables
- HPC_TRAITRATE_DIR - installation directory
Citation
If you publish research that uses traitrate you have to cite it as follows:
Mayrose I and Otto SP. 2011. A Likelihood Method for Detecting Trait-Dependent Shifts in the Rate of Molecular Evolution. Mol Biol Evol. 28:781-791.