Difference between revisions of "EQTLA"
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Moskalenko (talk | contribs) (Created page with "Category:SoftwareCategory:BioinformaticsCategory:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|eqtla}} |{{#vardefine:url|http://research.lunenfeld.ca...") |
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| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Biology]][[Category:Genomics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|eqtla}} | |{{#vardefine:app|eqtla}} | ||
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The core motivation behind the design of eQTLA was to create a tool which can efficiently perform eQTL analysis. eQTLA is capable of performing both cis- and trans-eQTL analysis given a set of raw genetic marker data and expression values. | The core motivation behind the design of eQTLA was to create a tool which can efficiently perform eQTL analysis. eQTLA is capable of performing both cis- and trans-eQTL analysis given a set of raw genetic marker data and expression values. | ||
<!--Modules--> | <!--Modules--> | ||
| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
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==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
<!--Configuration--> | <!--Configuration--> | ||
{{#if: {{#var: conf}}|==Configuration== | {{#if: {{#var: conf}}|==Configuration== | ||
Latest revision as of 18:52, 12 August 2022
Description
The core motivation behind the design of eQTLA was to create a tool which can efficiently perform eQTL analysis. eQTLA is capable of performing both cis- and trans-eQTL analysis given a set of raw genetic marker data and expression values.
Environment Modules
Run module spider eqtla to find out what environment modules are available for this application.
System Variables
- HPC_EQTLA_DIR - installation directory