Difference between revisions of "NMRPipe"
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(Created page with "Category:SoftwareCategory:Biochemistry[[Category:]] {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|NMRPipe}} |{{#vardefine:url|http://spin.niddk.nih.gov/NMRPipe/}}...") |
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| − | [[Category:Software]][[Category: | + | [[Category:Software]][[Category:Biology]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|NMRPipe}} | |{{#vardefine:app|NMRPipe}} | ||
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|{{#vardefine:testing|}} <!--TESTING/PROFILING--> | |{{#vardefine:testing|}} <!--TESTING/PROFILING--> | ||
|{{#vardefine:faq|}} <!--FAQ--> | |{{#vardefine:faq|}} <!--FAQ--> | ||
| − | |{{#vardefine:citation|}} <!--CITATION--> | + | |{{#vardefine:citation|1}} <!--CITATION--> |
|{{#vardefine:installation|}} <!--INSTALLATION--> | |{{#vardefine:installation|}} <!--INSTALLATION--> | ||
|} | |} | ||
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{{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | {{App_Description|app={{#var:app}}|url={{#var:url}}|name={{#var:app}}}}|}} | ||
| − | + | NMRPipe is an extensive software system for processing, analyzing, and exploiting NMR spectroscopic data. An NMRPipe installation also provides the applications NMRDraw, NMRWish, TALOS+, SPARTA+, DYNAMO, DC, MFR, ACME, and others. | |
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<!--Modules--> | <!--Modules--> | ||
| − | == | + | ==Environment Modules== |
| − | + | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | |
| − | |||
| − | |||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
| + | * HPC_{{uc:{{#var:app}}}}_LIB - library directory | ||
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<!--Run--> | <!--Run--> | ||
{{#if: {{#var: exe}}|==How To Run== | {{#if: {{#var: exe}}|==How To Run== | ||
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{{#if: {{#var: citation}}|==Citation== | {{#if: {{#var: citation}}|==Citation== | ||
If you publish research that uses {{#var:app}} you have to cite it as follows: | If you publish research that uses {{#var:app}} you have to cite it as follows: | ||
| − | + | ||
| + | F. Delaglio, S. Grzesiek, G. W. Vuister, G. Zhu, J. Pfeifer and A. Bax: NMRPipe: a multidimensional spectral processing system based on UNIX pipes, J. Biomol. NMR. 6, 277-293 (1995). | ||
|}} | |}} | ||
<!--Installation--> | <!--Installation--> | ||
Latest revision as of 15:55, 23 August 2022
Description
NMRPipe is an extensive software system for processing, analyzing, and exploiting NMR spectroscopic data. An NMRPipe installation also provides the applications NMRDraw, NMRWish, TALOS+, SPARTA+, DYNAMO, DC, MFR, ACME, and others.
Environment Modules
Run module spider NMRPipe to find out what environment modules are available for this application.
System Variables
- HPC_NMRPIPE_DIR - installation directory
- HPC_NMRPIPE_BIN - executable directory
- HPC_NMRPIPE_LIB - library directory
Citation
If you publish research that uses NMRPipe you have to cite it as follows:
F. Delaglio, S. Grzesiek, G. W. Vuister, G. Zhu, J. Pfeifer and A. Bax: NMRPipe: a multidimensional spectral processing system based on UNIX pipes, J. Biomol. NMR. 6, 277-293 (1995).