Difference between revisions of "EMBOSS"

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==System Variables==
 
==System Variables==
 
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
 
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
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{{#if: {{#var: exe}}|==Additional Information==
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EMBOSS is available both at the command line for use in the batch jobs and through the [[Galaxy]] Framework for Biocomputing.
 
EMBOSS is available both at the command line for use in the batch jobs and through the [[Galaxy]] Framework for Biocomputing.
 
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Revision as of 18:19, 10 August 2012

Description

emboss website  

EMBOSS is "The European Molecular Biology Open Software Suite". EMBOSS is a free Open Source software analysis package specially developed for the needs of the molecular biology (e.g. EMBnet) user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of sequence data from the web. Also, as extensive libraries are provided with the package, it is a platform to allow other scientists to develop and release software in true open source spirit. EMBOSS also integrates a range of currently available packages and tools for sequence analysis into a seamless whole. EMBOSS breaks the historical trend towards commercial software packages.

Required Modules

modules documentation

Serial

  • emboss

System Variables

  • HPC_{{#uppercase:emboss}}_DIR - installation directory

Additional Information

EMBOSS is available both at the command line for use in the batch jobs and through the Galaxy Framework for Biocomputing.