Difference between revisions of "PeakSplitter"
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Moskalenko (talk | contribs) m (Text replace - "<!--Location--> {{App_Location|app={{#var:app}}|{{#var:ver}}}}" to "") |
Moskalenko (talk | contribs) m (Text replace - "==Running the application using modules==" to "==Execution Environment and Modules==") |
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==Available Versions== | ==Available Versions== | ||
* 1.0 | * 1.0 | ||
| − | {{#if: {{#var: mod}}|== | + | {{#if: {{#var: mod}}|==Execution Environment and Modules== |
{{App_Module|app={{#var:app}}|intel={{#var:intel}}|mpi={{#var:mpi}}}}|}} | {{App_Module|app={{#var:app}}|intel={{#var:intel}}|mpi={{#var:mpi}}}}|}} | ||
{{#if: {{#var: exe}}|==How To Run== | {{#if: {{#var: exe}}|==How To Run== | ||
Revision as of 02:03, 10 August 2012
Description
Subdivision of ChIP-seq/ChIP-chip regions into discrete signal peaks.
Available Versions
- 1.0
Execution Environment and Modules
To use peaksplitter with the environment modules system at HPC the following commands are available:
Get module information for peaksplitter:
$module spider peaksplitter
Load the default application module:
$module load peaksplitter
The modulefile for this software adds the directory with executable files to the shell execution PATH and sets the following environment variables:
- HPC_PEAKSPLITTER_DIR - directory where peaksplitter is located.