Difference between revisions of "Miniprot"
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(Created page with "Category:Software {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|miniprot}} |{{#vardefine:url|https://help.rc.ufl.edu/doc/Miniprot}} <!--CONFIGURATION: OPTIONAL (|1}}...") |
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|{{#vardefine:app|miniprot}} | |{{#vardefine:app|miniprot}} | ||
| − | |{{#vardefine:url|https:// | + | |{{#vardefine:url|https://github.com/lh3/miniprot}} |
<!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | <!--CONFIGURATION: OPTIONAL (|1}} means it's ON)--> | ||
|{{#vardefine:conf|}} <!--CONFIGURATION--> | |{{#vardefine:conf|}} <!--CONFIGURATION--> | ||
Latest revision as of 19:48, 31 August 2023
Description
Miniprot is used to align proteins to genomes with splicing and frameshift.
Environment Modules
Run module spider miniprot to find out what environment modules are available for this application.
System Variables
- HPC_MINIPROT_DIR - installation directory
- HPC_MINIPROT_BIN - executable directory