Difference between revisions of "Vcf-validator"
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(Created page with "Category:SoftwareCategory:Biology {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|vcfvalidator}} |{{#vardefine:url|https://github.com/EBIvariation/vcf-validator}} <...") |
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| − | [[Category:Software]][[Category:Biology]] | + | [[Category:Software]][[Category:Biology]][[Category:Phylogenetics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|vcfvalidator}} | |{{#vardefine:app|vcfvalidator}} | ||
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Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application. | ||
==System Variables== | ==System Variables== | ||
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_DIR - installation directory |
| − | * HPC_{{ | + | * HPC_{{uc:{{#var:app}}}}_BIN - executable directory |
<!--Configuration--> | <!--Configuration--> | ||
Latest revision as of 17:27, 22 August 2022
Description
Validation suite for Variant Call Format (VCF) files, implemented using C++11
Environment Modules
Run module spider vcfvalidator to find out what environment modules are available for this application.
System Variables
- HPC_VCFVALIDATOR_DIR - installation directory
- HPC_VCFVALIDATOR_BIN - executable directory