Difference between revisions of "Squigglekit"
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| − | {{#if: {{#var: exe}}|==Additional Information== | + | {{#if: {{#var: exe}}1|==Additional Information== |
| − | + | <code>$ module load squigglekit/1.0.0</code> | |
| + | |||
| + | <code>$ fast5_fetcher.py</code> | ||
| + | |||
| + | <code>$ SquigglePlot.py</code> | ||
| + | |||
| + | <code>$ SquigglePull.py</code> | ||
|}} | |}} | ||
Latest revision as of 15:55, 22 August 2022
Description
A toolkit for manipulating nanopore signal data
Environment Modules
Run module spider squigglekit to find out what environment modules are available for this application.
System Variables
- HPC_SQUIGGLEKIT_DIR - installation directory
- HPC_SQUIGGLEKIT_BIN - executable directory
Additional Information
$ module load squigglekit/1.0.0
$ fast5_fetcher.py
$ SquigglePlot.py
$ SquigglePull.py