Difference between revisions of "Sourmash"
Jump to navigation
Jump to search
Moskalenko (talk | contribs) m (Text replacement - "#uppercase" to "uc") |
|||
| Line 1: | Line 1: | ||
| − | [[Category:Software]] | + | [[Category:Software]][[Category:Phylogenetics]] |
{|<!--CONFIGURATION: REQUIRED--> | {|<!--CONFIGURATION: REQUIRED--> | ||
|{{#vardefine:app|sourmash}} | |{{#vardefine:app|sourmash}} | ||
Latest revision as of 15:45, 22 August 2022
Description
Compute and compare MinHash signatures for DNA data sets.
Environment Modules
Run module spider sourmash to find out what environment modules are available for this application.
System Variables
- HPC_SOURMASH_DIR - installation directory
- HPC_SOURMASH_BIN - executable directory
Citation
If you publish research that uses sourmash you have to cite it as follows:
Sourmash 1.0 is published on JOSS; please cite that paper if you use (doi: 10.21105/joss.00027):.