SEQPower: Difference between revisions

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Created page with "Category:SoftwareCategory:BioinformaticsCategory:Genomics {|<!--CONFIGURATION: REQUIRED--> |{{#vardefine:app|seqpower}} |{{#vardefine:url|http://www.bioinformatics..."
 
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[[Category:Software]][[Category:Bioinformatics]][[Category:Genomics]]
[[Category:Software]][[Category:Biology]][[Category:Genomics]][[Category:Phylogenetics]]
{|<!--CONFIGURATION: REQUIRED-->
{|<!--CONFIGURATION: REQUIRED-->
|{{#vardefine:app|seqpower}}
|{{#vardefine:app|seqpower}}
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|{{#vardefine:testing|}}      <!--PROFILING-->
|{{#vardefine:testing|}}      <!--PROFILING-->
|{{#vardefine:faq|}}            <!--FAQ-->
|{{#vardefine:faq|}}            <!--FAQ-->
|{{#vardefine:citation|}}      <!--CITATION-->
|{{#vardefine:citation|1}}      <!--CITATION-->
|{{#vardefine:installation|}} <!--INSTALLATION-->
|{{#vardefine:installation|}} <!--INSTALLATION-->
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<!--Modules-->
<!--Modules-->
==Required Modules==
==Environment Modules==
==Serial===
Run <code>module spider {{#var:app}}</code> to find out what environment modules are available for this application.
* gcc/5.2.0
* {{#var:app}}
<!--
===Parallel (OpenMP)===
* intel
* {{#var:app}}
===Parallel (MPI)===
* intel
* openmpi
* {{#var:app}}
-->
==System Variables==
==System Variables==
* HPC_{{#uppercase:{{#var:app}}}}_DIR - installation directory
* HPC_{{uc:{{#var:app}}}}_DIR - installation directory
<!--Configuration-->
<!--Configuration-->
{{#if: {{#var: conf}}|==Configuration==
{{#if: {{#var: conf}}|==Configuration==
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If you publish research that uses {{#var:app}} you have to cite it as follows:
If you publish research that uses {{#var:app}} you have to cite it as follows:


WRITE_CITATION_HERE
[http://www.ncbi.nlm.nih.gov/pubmed/24778108 G. T. Wang, B. Li, R. L. P. Santos-Cortez, B. Peng and S. M. Leal, Power analysis and sample size estimation for sequence-based association studies. Bioinformatics. (2014)]


|}}
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Latest revision as of 22:38, 21 August 2022

Description

seqpower website  

SEQPower provides statistical power analysis and sample size estimation for sequence-based association studies.

Environment Modules

Run module spider seqpower to find out what environment modules are available for this application.

System Variables

  • HPC_SEQPOWER_DIR - installation directory




Citation

If you publish research that uses seqpower you have to cite it as follows:

G. T. Wang, B. Li, R. L. P. Santos-Cortez, B. Peng and S. M. Leal, Power analysis and sample size estimation for sequence-based association studies. Bioinformatics. (2014)